Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.92■□□□□ 0.62
VCLP18206 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.92■□□□□ 0.62
VCLP18206 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
VCLP18206 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VCLP18206 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 AC104417.2-201ENST00000562989 1793 ntBASIC18.91■□□□□ 0.62
VCLP18206 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 AC011506.1-201ENST00000474329 610 ntBASIC18.91■□□□□ 0.62
VCLP18206 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.91■□□□□ 0.62
VCLP18206 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.91■□□□□ 0.62
VCLP18206 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.91■□□□□ 0.62
VCLP18206 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
VCLP18206 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VCLP18206 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 LINC01465-201ENST00000408887 1940 ntBASIC18.9■□□□□ 0.62
VCLP18206 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VCLP18206 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VCLP18206 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.9■□□□□ 0.62
VCLP18206 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VCLP18206 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.9■□□□□ 0.62
VCLP18206 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.9■□□□□ 0.62
VCLP18206 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.9■□□□□ 0.62
VCLP18206 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.9■□□□□ 0.62
VCLP18206 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VCLP18206 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VCLP18206 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.9■□□□□ 0.62
VCLP18206 AC079598.2-202ENST00000546624 1451 ntBASIC18.9■□□□□ 0.62
VCLP18206 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VCLP18206 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.9■□□□□ 0.62
VCLP18206 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.9■□□□□ 0.62
VCLP18206 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VCLP18206 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
VCLP18206 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VCLP18206 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.89■□□□□ 0.61
VCLP18206 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCLP18206 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VCLP18206 MMP23A-201ENST00000234610 1017 ntBASIC18.89■□□□□ 0.61
VCLP18206 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VCLP18206 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 MESTP1-201ENST00000404287 994 ntBASIC18.89■□□□□ 0.61
VCLP18206 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.89■□□□□ 0.61
VCLP18206 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.89■□□□□ 0.61
VCLP18206 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.89■□□□□ 0.61
VCLP18206 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.89■□□□□ 0.61
VCLP18206 AP000525.1-201ENST00000608286 694 ntBASIC18.89■□□□□ 0.61
VCLP18206 AP000692.2-201ENST00000608391 879 ntBASIC18.89■□□□□ 0.61
VCLP18206 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.89■□□□□ 0.61
VCLP18206 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.89■□□□□ 0.61
VCLP18206 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.89■□□□□ 0.61
VCLP18206 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
VCLP18206 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms