Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.52■□□□□ 0.72
CD48P09326 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD48P09326 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.52■□□□□ 0.71
CD48P09326 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD48P09326 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CD48P09326 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.52■□□□□ 0.71
CD48P09326 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD48P09326 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CD48P09326 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CD48P09326 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.51■□□□□ 0.71
CD48P09326 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 AC126763.1-201ENST00000552015 2118 ntBASIC19.51■□□□□ 0.71
CD48P09326 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.51■□□□□ 0.71
CD48P09326 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.51■□□□□ 0.71
CD48P09326 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.51■□□□□ 0.71
CD48P09326 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.51■□□□□ 0.71
CD48P09326 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 AC026471.5-201ENST00000615068 467 ntBASIC19.51■□□□□ 0.71
CD48P09326 AC008622.2-201ENST00000617006 1229 ntBASIC19.51■□□□□ 0.71
CD48P09326 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 AC096733.2-201ENST00000609937 1394 ntBASIC19.51■□□□□ 0.71
CD48P09326 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.51■□□□□ 0.71
CD48P09326 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD48P09326 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.51■□□□□ 0.71
CD48P09326 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.51■□□□□ 0.71
CD48P09326 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CD48P09326 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.5■□□□□ 0.71
CD48P09326 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.5■□□□□ 0.71
CD48P09326 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CD48P09326 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.5■□□□□ 0.71
CD48P09326 TSPY7P-201ENST00000431358 1114 ntBASIC19.5■□□□□ 0.71
CD48P09326 MFAP1P1-201ENST00000442257 1255 ntBASIC19.5■□□□□ 0.71
CD48P09326 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 SLC25A1P4-201ENST00000567977 778 ntBASIC19.5■□□□□ 0.71
CD48P09326 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.5■□□□□ 0.71
CD48P09326 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 AP001412.1-201ENST00000608405 714 ntBASIC19.5■□□□□ 0.71
CD48P09326 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CD48P09326 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.5■□□□□ 0.71
CD48P09326 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.5■□□□□ 0.71
CD48P09326 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD48P09326 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.5■□□□□ 0.71
CD48P09326 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD48P09326 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 AC090164.3-201ENST00000610780 2143 ntBASIC19.49■□□□□ 0.71
CD48P09326 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.49■□□□□ 0.71
CD48P09326 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.49■□□□□ 0.71
CD48P09326 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.49■□□□□ 0.71
CD48P09326 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.49■□□□□ 0.71
CD48P09326 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 AC007613.1-201ENST00000572811 2597 ntBASIC19.49■□□□□ 0.71
CD48P09326 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms