Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS1P07996 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS1P07996 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.33■□□□□ 0.37
THBS1P07996 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS1P07996 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.33■□□□□ 0.37
THBS1P07996 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.33■□□□□ 0.37
THBS1P07996 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS1P07996 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
THBS1P07996 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.33■□□□□ 0.37
THBS1P07996 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.33■□□□□ 0.36
THBS1P07996 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.33■□□□□ 0.36
THBS1P07996 AC011506.1-201ENST00000474329 610 ntBASIC17.33■□□□□ 0.36
THBS1P07996 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.33■□□□□ 0.36
THBS1P07996 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.33■□□□□ 0.36
THBS1P07996 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
THBS1P07996 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.33■□□□□ 0.36
THBS1P07996 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.33■□□□□ 0.36
THBS1P07996 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
THBS1P07996 NEFHP1-201ENST00000412845 2629 ntBASIC17.33■□□□□ 0.36
THBS1P07996 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.33■□□□□ 0.36
THBS1P07996 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
THBS1P07996 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS1P07996 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS1P07996 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.32■□□□□ 0.36
THBS1P07996 AC104581.1-202ENST00000635932 2618 ntBASIC17.32■□□□□ 0.36
THBS1P07996 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 MIR4497-201ENST00000583208 89 ntBASIC17.32■□□□□ 0.36
THBS1P07996 Z99916.2-201ENST00000604037 246 ntBASIC17.32■□□□□ 0.36
THBS1P07996 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
THBS1P07996 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
THBS1P07996 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.32■□□□□ 0.36
THBS1P07996 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS1P07996 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.32■□□□□ 0.36
THBS1P07996 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.32■□□□□ 0.36
THBS1P07996 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
THBS1P07996 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.31■□□□□ 0.36
THBS1P07996 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
THBS1P07996 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.31■□□□□ 0.36
THBS1P07996 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
THBS1P07996 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.31■□□□□ 0.36
THBS1P07996 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.31■□□□□ 0.36
THBS1P07996 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 MYC-208ENST00000641036 567 ntBASIC17.31■□□□□ 0.36
THBS1P07996 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.31■□□□□ 0.36
THBS1P07996 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
THBS1P07996 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
THBS1P07996 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
THBS1P07996 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
THBS1P07996 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
THBS1P07996 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.3■□□□□ 0.36
THBS1P07996 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
THBS1P07996 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
THBS1P07996 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms