Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.11■□□□□ 0.97
TPM3P06753 AC087623.3-201ENST00000607047 1098 ntBASIC21.11■□□□□ 0.97
TPM3P06753 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM3P06753 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TPM3P06753 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM3P06753 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
TPM3P06753 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM3P06753 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM3P06753 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM3P06753 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.11■□□□□ 0.97
TPM3P06753 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 AP006587.1-201ENST00000534129 1502 ntBASIC21.1■□□□□ 0.97
TPM3P06753 FEM1AP3-201ENST00000403722 1741 ntBASIC21.1■□□□□ 0.97
TPM3P06753 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.1■□□□□ 0.97
TPM3P06753 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.1■□□□□ 0.97
TPM3P06753 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.1■□□□□ 0.97
TPM3P06753 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TPM3P06753 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TPM3P06753 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.1■□□□□ 0.97
TPM3P06753 AC005181.1-201ENST00000604782 1256 ntBASIC21.1■□□□□ 0.97
TPM3P06753 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.1■□□□□ 0.97
TPM3P06753 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.1■□□□□ 0.97
TPM3P06753 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TPM3P06753 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM3P06753 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.09■□□□□ 0.97
TPM3P06753 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TPM3P06753 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 LINC00896-202ENST00000609602 2128 ntBASIC21.09■□□□□ 0.97
TPM3P06753 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
TPM3P06753 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.09■□□□□ 0.97
TPM3P06753 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.09■□□□□ 0.97
TPM3P06753 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.09■□□□□ 0.97
TPM3P06753 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TPM3P06753 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TPM3P06753 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TPM3P06753 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TPM3P06753 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TPM3P06753 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TPM3P06753 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TPM3P06753 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TPM3P06753 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.08■□□□□ 0.97
TPM3P06753 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.08■□□□□ 0.97
TPM3P06753 AC133552.2-202ENST00000575694 574 ntBASIC21.08■□□□□ 0.97
TPM3P06753 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TPM3P06753 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TPM3P06753 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC21.08■□□□□ 0.96
TPM3P06753 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TPM3P06753 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TPM3P06753 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TPM3P06753 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
TPM3P06753 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
TPM3P06753 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TPM3P06753 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.08■□□□□ 0.96
TPM3P06753 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TPM3P06753 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TPM3P06753 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TPM3P06753 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.07■□□□□ 0.96
TPM3P06753 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TPM3P06753 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TPM3P06753 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
TPM3P06753 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TPM3P06753 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms