Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.77■□□□□ 0.43
MT-ND1P03886 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
MT-ND1P03886 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.77■□□□□ 0.43
MT-ND1P03886 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND1P03886 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND1P03886 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MT-ND1P03886 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 KRT8P8-201ENST00000434750 1448 ntBASIC17.76■□□□□ 0.43
MT-ND1P03886 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MT-ND1P03886 GUSBP6-202ENST00000438529 1198 ntBASIC17.76■□□□□ 0.43
MT-ND1P03886 TSPY6P-201ENST00000448518 926 ntBASIC17.76■□□□□ 0.43
MT-ND1P03886 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.76■□□□□ 0.43
MT-ND1P03886 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.76■□□□□ 0.43
MT-ND1P03886 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.76■□□□□ 0.43
MT-ND1P03886 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.76■□□□□ 0.43
MT-ND1P03886 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MT-ND1P03886 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND1P03886 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND1P03886 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 AC139713.2-201ENST00000641328 2723 ntBASIC17.76■□□□□ 0.43
MT-ND1P03886 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND1P03886 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-ND1P03886 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-ND1P03886 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-ND1P03886 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.75■□□□□ 0.43
MT-ND1P03886 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-ND1P03886 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-ND1P03886 MIR4758-201ENST00000577688 71 ntBASIC17.75■□□□□ 0.43
MT-ND1P03886 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-ND1P03886 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
MT-ND1P03886 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MT-ND1P03886 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-ND1P03886 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND1P03886 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.75■□□□□ 0.43
MT-ND1P03886 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.74■□□□□ 0.43
MT-ND1P03886 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-ND1P03886 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.74■□□□□ 0.43
MT-ND1P03886 AC006557.6-201ENST00000623071 864 ntBASIC17.74■□□□□ 0.43
MT-ND1P03886 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MT-ND1P03886 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms