Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEACAM4O75871 GPR32P1-201ENST00000601788 811 ntBASIC17.09■□□□□ 0.33
CEACAM4O75871 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEACAM4O75871 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEACAM4O75871 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.09■□□□□ 0.33
CEACAM4O75871 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CEACAM4O75871 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.09■□□□□ 0.33
CEACAM4O75871 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEACAM4O75871 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CEACAM4O75871 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CEACAM4O75871 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CEACAM4O75871 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CEACAM4O75871 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.08■□□□□ 0.33
CEACAM4O75871 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
CEACAM4O75871 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CEACAM4O75871 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM4O75871 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.08■□□□□ 0.32
CEACAM4O75871 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM4O75871 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM4O75871 AC233702.3-201ENST00000578656 1387 ntBASIC17.08■□□□□ 0.32
CEACAM4O75871 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM4O75871 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 AC079781.3-201ENST00000449110 356 ntBASIC17.08■□□□□ 0.32
CEACAM4O75871 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.08■□□□□ 0.32
CEACAM4O75871 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 IGHV3-41-201ENST00000613121 348 ntBASIC17.08■□□□□ 0.32
CEACAM4O75871 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.08■□□□□ 0.32
CEACAM4O75871 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.08■□□□□ 0.32
CEACAM4O75871 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CEACAM4O75871 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CEACAM4O75871 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 IGHGP-201ENST00000390555 1178 ntBASIC17.07■□□□□ 0.32
CEACAM4O75871 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.07■□□□□ 0.32
CEACAM4O75871 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CEACAM4O75871 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.07■□□□□ 0.32
CEACAM4O75871 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.07■□□□□ 0.32
CEACAM4O75871 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CEACAM4O75871 AC006333.2-201ENST00000607957 2099 ntBASIC17.07■□□□□ 0.32
CEACAM4O75871 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CEACAM4O75871 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.07■□□□□ 0.32
CEACAM4O75871 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CEACAM4O75871 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CEACAM4O75871 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.06■□□□□ 0.32
CEACAM4O75871 AC074051.2-201ENST00000565115 352 ntBASIC17.06■□□□□ 0.32
CEACAM4O75871 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.06■□□□□ 0.32
CEACAM4O75871 Z69720.1-201ENST00000601483 472 ntBASIC17.06■□□□□ 0.32
CEACAM4O75871 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CEACAM4O75871 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CEACAM4O75871 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.06■□□□□ 0.32
CEACAM4O75871 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM4O75871 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM4O75871 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CEACAM4O75871 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.05■□□□□ 0.32
CEACAM4O75871 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms