Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UPK1BO75841 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
UPK1BO75841 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1BO75841 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
UPK1BO75841 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 HLA-G-202ENST00000376815 851 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 HLA-G-203ENST00000376818 1127 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 BX842568.3-201ENST00000418104 571 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 AL356740.2-201ENST00000601559 647 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 AL023806.1-201ENST00000603994 1649 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 AL596257.1-201ENST00000641463 2694 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 AC093677.2-201ENST00000600169 1863 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1BO75841 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.43■□□□□ 0.22
UPK1BO75841 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 PKD1P1-201ENST00000458669 6805 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 MST1L-201ENST00000442552 2185 ntBASIC16.43■□□□□ 0.22
UPK1BO75841 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
UPK1BO75841 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.43■□□□□ 0.22
UPK1BO75841 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
UPK1BO75841 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
UPK1BO75841 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
UPK1BO75841 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
UPK1BO75841 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
UPK1BO75841 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
UPK1BO75841 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.42■□□□□ 0.22
UPK1BO75841 AC239859.2-201ENST00000444165 318 ntBASIC16.42■□□□□ 0.22
UPK1BO75841 YBX1P1-201ENST00000445822 960 ntBASIC16.42■□□□□ 0.22
UPK1BO75841 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.42■□□□□ 0.22
UPK1BO75841 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.42■□□□□ 0.22
UPK1BO75841 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.42■□□□□ 0.22
UPK1BO75841 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
UPK1BO75841 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.42■□□□□ 0.22
UPK1BO75841 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
UPK1BO75841 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
UPK1BO75841 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.42■□□□□ 0.22
UPK1BO75841 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
UPK1BO75841 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.41■□□□□ 0.22
UPK1BO75841 AC104417.2-201ENST00000562989 1793 ntBASIC16.41■□□□□ 0.22
UPK1BO75841 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.41■□□□□ 0.22
UPK1BO75841 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.41■□□□□ 0.22
UPK1BO75841 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.41■□□□□ 0.22
UPK1BO75841 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.41■□□□□ 0.22
UPK1BO75841 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
UPK1BO75841 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
UPK1BO75841 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
UPK1BO75841 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
UPK1BO75841 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.41■□□□□ 0.22
UPK1BO75841 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
UPK1BO75841 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UPK1BO75841 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms