Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PRAMEF11O60813 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRAMEF11O60813 TNXA-203ENST00000507684 2038 ntBASIC19.08■□□□□ 0.65
PRAMEF11O60813 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEF11O60813 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRAMEF11O60813 TERF1P1-201ENST00000311003 1181 ntBASIC19.08■□□□□ 0.64
PRAMEF11O60813 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 AL138966.2-201ENST00000621997 464 ntBASIC19.08■□□□□ 0.64
PRAMEF11O60813 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 AL357033.4-201ENST00000617703 1807 ntBASIC19.08■□□□□ 0.64
PRAMEF11O60813 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 AC073508.3-201ENST00000619697 1419 ntBASIC19.08■□□□□ 0.64
PRAMEF11O60813 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.08■□□□□ 0.64
PRAMEF11O60813 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRAMEF11O60813 AC087289.5-201ENST00000586076 3175 ntBASIC19.07■□□□□ 0.64
PRAMEF11O60813 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.07■□□□□ 0.64
PRAMEF11O60813 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.07■□□□□ 0.64
PRAMEF11O60813 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 AC005521.1-201ENST00000393351 872 ntBASIC19.07■□□□□ 0.64
PRAMEF11O60813 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 AL137013.1-201ENST00000432946 1228 ntBASIC19.07■□□□□ 0.64
PRAMEF11O60813 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.07■□□□□ 0.64
PRAMEF11O60813 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
PRAMEF11O60813 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.07■□□□□ 0.64
PRAMEF11O60813 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRAMEF11O60813 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF11O60813 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 LIN28AP1-201ENST00000429574 405 ntBASIC19.06■□□□□ 0.64
PRAMEF11O60813 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF11O60813 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF11O60813 AL031598.1-201ENST00000561511 1773 ntBASIC19.06■□□□□ 0.64
PRAMEF11O60813 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF11O60813 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF11O60813 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRAMEF11O60813 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF11O60813 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms