Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.37■■□□□ 1.01
CCNT1O60563 AL023284.2-201ENST00000405850 579 ntBASIC21.37■■□□□ 1.01
CCNT1O60563 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCNT1O60563 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNT1O60563 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNT1O60563 MIR4674-201ENST00000582457 87 ntBASIC21.37■■□□□ 1.01
CCNT1O60563 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 AC145285.6-201ENST00000604632 637 ntBASIC21.37■■□□□ 1.01
CCNT1O60563 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CCNT1O60563 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNT1O60563 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCNT1O60563 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCNT1O60563 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNT1O60563 CROCCP3-202ENST00000420820 1947 ntBASIC21.37■■□□□ 1.01
CCNT1O60563 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
CCNT1O60563 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNT1O60563 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNT1O60563 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CCNT1O60563 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNT1O60563 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNT1O60563 AC211429.1-201ENST00000415277 523 ntBASIC21.36■■□□□ 1.01
CCNT1O60563 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNT1O60563 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCNT1O60563 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 AC093503.3-201ENST00000624917 2352 ntBASIC21.36■■□□□ 1.01
CCNT1O60563 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNT1O60563 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.35■■□□□ 1.01
CCNT1O60563 KRT18P22-201ENST00000402024 1347 ntBASIC21.35■■□□□ 1.01
CCNT1O60563 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCNT1O60563 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 AC008556.1-201ENST00000610908 2040 ntBASIC21.35■■□□□ 1.01
CCNT1O60563 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
CCNT1O60563 AC010653.2-201ENST00000623505 997 ntBASIC21.35■■□□□ 1.01
CCNT1O60563 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CCNT1O60563 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.35■■□□□ 1.01
CCNT1O60563 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNT1O60563 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNT1O60563 AC004408.2-201ENST00000623613 2777 ntBASIC21.35■■□□□ 1.01
CCNT1O60563 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCNT1O60563 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCNT1O60563 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNT1O60563 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CCNT1O60563 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNT1O60563 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNT1O60563 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
CCNT1O60563 MCCD1P1-208ENST00000445732 328 ntBASIC21.34■■□□□ 1.01
CCNT1O60563 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 FAM87A-204ENST00000613235 858 ntBASIC21.34■■□□□ 1.01
CCNT1O60563 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCNT1O60563 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNT1O60563 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.34■■□□□ 1.01
CCNT1O60563 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCNT1O60563 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms