Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.63■□□□□ 0.57
NOBOXO60393 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
NOBOXO60393 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.63■□□□□ 0.57
NOBOXO60393 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.63■□□□□ 0.57
NOBOXO60393 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NOBOXO60393 YBX1P2-201ENST00000489612 999 ntBASIC18.63■□□□□ 0.57
NOBOXO60393 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.63■□□□□ 0.57
NOBOXO60393 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NOBOXO60393 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.63■□□□□ 0.57
NOBOXO60393 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NOBOXO60393 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.63■□□□□ 0.57
NOBOXO60393 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOBOXO60393 ZNF815P-204ENST00000434898 1737 ntBASIC18.63■□□□□ 0.57
NOBOXO60393 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NOBOXO60393 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.62■□□□□ 0.57
NOBOXO60393 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
NOBOXO60393 RNF152P1-201ENST00000397754 604 ntBASIC18.62■□□□□ 0.57
NOBOXO60393 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 COX11P1-201ENST00000489116 835 ntBASIC18.62■□□□□ 0.57
NOBOXO60393 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.62■□□□□ 0.57
NOBOXO60393 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.62■□□□□ 0.57
NOBOXO60393 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.62■□□□□ 0.57
NOBOXO60393 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.62■□□□□ 0.57
NOBOXO60393 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.62■□□□□ 0.57
NOBOXO60393 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.62■□□□□ 0.57
NOBOXO60393 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.62■□□□□ 0.57
NOBOXO60393 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.62■□□□□ 0.57
NOBOXO60393 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.62■□□□□ 0.57
NOBOXO60393 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NOBOXO60393 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
NOBOXO60393 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NOBOXO60393 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NOBOXO60393 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.62■□□□□ 0.57
NOBOXO60393 AC093503.3-201ENST00000624917 2352 ntBASIC18.62■□□□□ 0.57
NOBOXO60393 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NOBOXO60393 NEFHP1-201ENST00000412845 2629 ntBASIC18.61■□□□□ 0.57
NOBOXO60393 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.61■□□□□ 0.57
NOBOXO60393 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.61■□□□□ 0.57
NOBOXO60393 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NOBOXO60393 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NOBOXO60393 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
NOBOXO60393 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NOBOXO60393 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NOBOXO60393 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.61■□□□□ 0.57
NOBOXO60393 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.61■□□□□ 0.57
NOBOXO60393 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NOBOXO60393 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NOBOXO60393 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NOBOXO60393 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NOBOXO60393 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NOBOXO60393 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NOBOXO60393 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NOBOXO60393 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NOBOXO60393 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.6■□□□□ 0.57
NOBOXO60393 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NOBOXO60393 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.6■□□□□ 0.57
NOBOXO60393 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NOBOXO60393 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NOBOXO60393 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NOBOXO60393 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NOBOXO60393 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NOBOXO60393 FAM8A6P-201ENST00000407496 1135 ntBASIC18.6■□□□□ 0.57
NOBOXO60393 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.6■□□□□ 0.57
NOBOXO60393 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.6■□□□□ 0.57
NOBOXO60393 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.6■□□□□ 0.57
NOBOXO60393 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.6■□□□□ 0.57
NOBOXO60393 AL512604.3-201ENST00000569583 964 ntBASIC18.6■□□□□ 0.57
NOBOXO60393 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NOBOXO60393 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms