Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX4O43316 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
PAX4O43316 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
PAX4O43316 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
PAX4O43316 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 AC004951.3-201ENST00000418645 1148 ntBASIC13.46□□□□□ -0.25
PAX4O43316 AC004980.1-204ENST00000429707 299 ntBASIC13.46□□□□□ -0.25
PAX4O43316 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.46□□□□□ -0.25
PAX4O43316 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.46□□□□□ -0.25
PAX4O43316 AC233702.5-201ENST00000584107 538 ntBASIC13.46□□□□□ -0.25
PAX4O43316 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.46□□□□□ -0.25
PAX4O43316 AL049637.2-201ENST00000641778 930 ntBASIC13.46□□□□□ -0.25
PAX4O43316 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
PAX4O43316 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
PAX4O43316 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PAX4O43316 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
PAX4O43316 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
PAX4O43316 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
PAX4O43316 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
PAX4O43316 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.46□□□□□ -0.26
PAX4O43316 AC141586.3-201ENST00000562166 1838 ntBASIC13.46□□□□□ -0.26
PAX4O43316 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
PAX4O43316 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 TEX21P-204ENST00000641479 1693 ntBASIC13.45□□□□□ -0.26
PAX4O43316 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 AL355355.2-201ENST00000442321 338 ntBASIC13.45□□□□□ -0.26
PAX4O43316 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.45□□□□□ -0.26
PAX4O43316 AC026271.3-201ENST00000571884 352 ntBASIC13.45□□□□□ -0.26
PAX4O43316 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
PAX4O43316 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.45□□□□□ -0.26
PAX4O43316 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 AC098818.2-201ENST00000564925 2320 ntBASIC13.45□□□□□ -0.26
PAX4O43316 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.45□□□□□ -0.26
PAX4O43316 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PAX4O43316 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.44□□□□□ -0.26
PAX4O43316 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.44□□□□□ -0.26
PAX4O43316 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.44□□□□□ -0.26
PAX4O43316 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 FSCN1P1-201ENST00000568912 1481 ntBASIC13.44□□□□□ -0.26
PAX4O43316 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PAX4O43316 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.44□□□□□ -0.26
PAX4O43316 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms