Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.36■■□□□ 1.33
SRGAP3O43295 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
SRGAP3O43295 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SRGAP3O43295 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.36■■□□□ 1.33
SRGAP3O43295 AL512604.3-201ENST00000569583 964 ntBASIC23.36■■□□□ 1.33
SRGAP3O43295 WWOX-216ENST00000569818 525 ntBASIC23.36■■□□□ 1.33
SRGAP3O43295 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.36■■□□□ 1.33
SRGAP3O43295 MIR3180-5-201ENST00000583743 153 ntBASIC23.36■■□□□ 1.33
SRGAP3O43295 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.36■■□□□ 1.33
SRGAP3O43295 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SRGAP3O43295 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
SRGAP3O43295 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.35■■□□□ 1.33
SRGAP3O43295 AC141257.4-201ENST00000634557 245 ntBASIC23.35■■□□□ 1.33
SRGAP3O43295 AC136944.6-201ENST00000634818 245 ntBASIC23.35■■□□□ 1.33
SRGAP3O43295 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SRGAP3O43295 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SRGAP3O43295 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SRGAP3O43295 AC098818.2-201ENST00000564925 2320 ntBASIC23.34■■□□□ 1.33
SRGAP3O43295 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
SRGAP3O43295 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.34■■□□□ 1.33
SRGAP3O43295 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.34■■□□□ 1.33
SRGAP3O43295 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.34■■□□□ 1.33
SRGAP3O43295 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SRGAP3O43295 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.34■■□□□ 1.33
SRGAP3O43295 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 TMPOP1-202ENST00000424642 1267 ntBASIC23.34■■□□□ 1.33
SRGAP3O43295 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
SRGAP3O43295 AC009947.2-201ENST00000444014 672 ntBASIC23.34■■□□□ 1.33
SRGAP3O43295 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.34■■□□□ 1.33
SRGAP3O43295 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.34■■□□□ 1.33
SRGAP3O43295 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.34■■□□□ 1.33
SRGAP3O43295 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SRGAP3O43295 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
SRGAP3O43295 MTMR9LP-203ENST00000426597 1545 ntBASIC23.33■■□□□ 1.33
SRGAP3O43295 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.33■■□□□ 1.33
SRGAP3O43295 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SRGAP3O43295 AC087289.5-201ENST00000586076 3175 ntBASIC23.33■■□□□ 1.33
SRGAP3O43295 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.33■■□□□ 1.33
SRGAP3O43295 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.33■■□□□ 1.33
SRGAP3O43295 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.33■■□□□ 1.33
SRGAP3O43295 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.33■■□□□ 1.33
SRGAP3O43295 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.33■■□□□ 1.33
SRGAP3O43295 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.33■■□□□ 1.33
SRGAP3O43295 RBM42-202ENST00000586618 771 ntTSL 3 BASIC23.33■■□□□ 1.33
SRGAP3O43295 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.33■■□□□ 1.33
SRGAP3O43295 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.33■■□□□ 1.33
SRGAP3O43295 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SRGAP3O43295 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SRGAP3O43295 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
SRGAP3O43295 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.33■■□□□ 1.33
SRGAP3O43295 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.33■■□□□ 1.32
SRGAP3O43295 AC018445.3-201ENST00000624177 1945 ntBASIC23.33■■□□□ 1.32
SRGAP3O43295 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.33■■□□□ 1.32
SRGAP3O43295 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SRGAP3O43295 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SRGAP3O43295 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.33■■□□□ 1.32
SRGAP3O43295 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRGAP3O43295 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SRGAP3O43295 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRGAP3O43295 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SRGAP3O43295 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SRGAP3O43295 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms