Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.75■□□□□ 0.59
PHGDHO43175 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHGDHO43175 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.74■□□□□ 0.59
PHGDHO43175 AC126763.1-201ENST00000552015 2118 ntBASIC18.74■□□□□ 0.59
PHGDHO43175 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PHGDHO43175 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.74■□□□□ 0.59
PHGDHO43175 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.74■□□□□ 0.59
PHGDHO43175 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.74■□□□□ 0.59
PHGDHO43175 RN7SL471P-201ENST00000580476 299 ntBASIC18.74■□□□□ 0.59
PHGDHO43175 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 AC006058.3-201ENST00000606217 1069 ntBASIC18.74■□□□□ 0.59
PHGDHO43175 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PHGDHO43175 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PHGDHO43175 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
PHGDHO43175 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHGDHO43175 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.74■□□□□ 0.59
PHGDHO43175 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PHGDHO43175 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.73■□□□□ 0.59
PHGDHO43175 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.73■□□□□ 0.59
PHGDHO43175 POU5F1P3-201ENST00000428824 1078 ntBASIC18.73■□□□□ 0.59
PHGDHO43175 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.73■□□□□ 0.59
PHGDHO43175 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.73■□□□□ 0.59
PHGDHO43175 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.73■□□□□ 0.59
PHGDHO43175 AC110285.5-201ENST00000611501 352 ntBASIC18.73■□□□□ 0.59
PHGDHO43175 AL445675.2-201ENST00000620291 557 ntBASIC18.73■□□□□ 0.59
PHGDHO43175 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.73■□□□□ 0.59
PHGDHO43175 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PHGDHO43175 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.73■□□□□ 0.59
PHGDHO43175 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PHGDHO43175 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.73■□□□□ 0.59
PHGDHO43175 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PHGDHO43175 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PHGDHO43175 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
PHGDHO43175 RCC2P6-201ENST00000526625 1557 ntBASIC18.72■□□□□ 0.59
PHGDHO43175 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PHGDHO43175 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PHGDHO43175 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 BICD1-207ENST00000551848 1962 ntBASIC18.72■□□□□ 0.59
PHGDHO43175 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PHGDHO43175 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 AC133681.1-201ENST00000465482 601 ntBASIC18.72■□□□□ 0.59
PHGDHO43175 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.72■□□□□ 0.59
PHGDHO43175 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.72■□□□□ 0.59
PHGDHO43175 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.72■□□□□ 0.59
PHGDHO43175 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PHGDHO43175 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PHGDHO43175 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PHGDHO43175 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PHGDHO43175 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 HEIH-201ENST00000623091 1652 ntBASIC18.72■□□□□ 0.59
PHGDHO43175 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHGDHO43175 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.71■□□□□ 0.59
PHGDHO43175 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PHGDHO43175 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PHGDHO43175 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms