Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 KRT8P32-201ENST00000512863 1461 ntBASIC18.29■□□□□ 0.52
UBFD1O14562 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.29■□□□□ 0.52
UBFD1O14562 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.29■□□□□ 0.52
UBFD1O14562 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.29■□□□□ 0.52
UBFD1O14562 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
UBFD1O14562 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBFD1O14562 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.28■□□□□ 0.52
UBFD1O14562 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.28■□□□□ 0.52
UBFD1O14562 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UBFD1O14562 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UBFD1O14562 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 ESRRAP1-201ENST00000400596 1257 ntBASIC18.28■□□□□ 0.52
UBFD1O14562 AC133681.1-201ENST00000465482 601 ntBASIC18.28■□□□□ 0.52
UBFD1O14562 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.28■□□□□ 0.52
UBFD1O14562 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.28■□□□□ 0.52
UBFD1O14562 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.28■□□□□ 0.52
UBFD1O14562 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.28■□□□□ 0.52
UBFD1O14562 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.28■□□□□ 0.52
UBFD1O14562 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBFD1O14562 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
UBFD1O14562 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
UBFD1O14562 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.27■□□□□ 0.52
UBFD1O14562 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.27■□□□□ 0.52
UBFD1O14562 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.27■□□□□ 0.52
UBFD1O14562 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.27■□□□□ 0.52
UBFD1O14562 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.27■□□□□ 0.52
UBFD1O14562 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.27■□□□□ 0.52
UBFD1O14562 KRT18P6-201ENST00000555540 1265 ntBASIC18.27■□□□□ 0.52
UBFD1O14562 RN7SL471P-201ENST00000580476 299 ntBASIC18.27■□□□□ 0.52
UBFD1O14562 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 PCDHB18P-201ENST00000524813 2368 ntBASIC18.27■□□□□ 0.52
UBFD1O14562 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBFD1O14562 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBFD1O14562 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.27■□□□□ 0.51
UBFD1O14562 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.27■□□□□ 0.51
UBFD1O14562 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBFD1O14562 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.27■□□□□ 0.51
UBFD1O14562 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBFD1O14562 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.26■□□□□ 0.51
UBFD1O14562 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.26■□□□□ 0.51
UBFD1O14562 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.26■□□□□ 0.51
UBFD1O14562 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UBFD1O14562 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
UBFD1O14562 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.26■□□□□ 0.51
UBFD1O14562 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.26■□□□□ 0.51
UBFD1O14562 NIFKP9-201ENST00000419265 221 ntBASIC18.26■□□□□ 0.51
UBFD1O14562 RPS2P4-201ENST00000476944 856 ntBASIC18.26■□□□□ 0.51
UBFD1O14562 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.26■□□□□ 0.51
UBFD1O14562 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.26■□□□□ 0.51
UBFD1O14562 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.26■□□□□ 0.51
UBFD1O14562 AC110285.5-201ENST00000611501 352 ntBASIC18.26■□□□□ 0.51
UBFD1O14562 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.26■□□□□ 0.51
UBFD1O14562 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.26■□□□□ 0.51
UBFD1O14562 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBFD1O14562 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBFD1O14562 KRT8P3-201ENST00000519669 1449 ntBASIC18.25■□□□□ 0.51
UBFD1O14562 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UBFD1O14562 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms