Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
UPK1AO00322 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.88■□□□□ 0.45
UPK1AO00322 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
UPK1AO00322 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.88■□□□□ 0.45
UPK1AO00322 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.88■□□□□ 0.45
UPK1AO00322 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UPK1AO00322 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
UPK1AO00322 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.87■□□□□ 0.45
UPK1AO00322 AC067852.2-201ENST00000590513 2313 ntBASIC17.87■□□□□ 0.45
UPK1AO00322 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 TSPY21P-201ENST00000433481 731 ntBASIC17.87■□□□□ 0.45
UPK1AO00322 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.87■□□□□ 0.45
UPK1AO00322 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.87■□□□□ 0.45
UPK1AO00322 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.87■□□□□ 0.45
UPK1AO00322 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UPK1AO00322 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UPK1AO00322 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UPK1AO00322 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UPK1AO00322 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UPK1AO00322 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UPK1AO00322 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
UPK1AO00322 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
UPK1AO00322 TSPY23P-201ENST00000440136 739 ntBASIC17.86■□□□□ 0.45
UPK1AO00322 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.86■□□□□ 0.45
UPK1AO00322 AL158047.1-201ENST00000445918 881 ntBASIC17.86■□□□□ 0.45
UPK1AO00322 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.86■□□□□ 0.45
UPK1AO00322 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1AO00322 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UPK1AO00322 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
UPK1AO00322 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.86■□□□□ 0.45
UPK1AO00322 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
UPK1AO00322 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.86■□□□□ 0.45
UPK1AO00322 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
UPK1AO00322 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK1AO00322 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK1AO00322 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK1AO00322 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
UPK1AO00322 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 KRT16P1-201ENST00000399124 1418 ntBASIC17.85■□□□□ 0.45
UPK1AO00322 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.85■□□□□ 0.45
UPK1AO00322 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
UPK1AO00322 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK1AO00322 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
UPK1AO00322 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.85■□□□□ 0.45
UPK1AO00322 AC073195.1-201ENST00000607241 877 ntBASIC17.85■□□□□ 0.45
UPK1AO00322 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.85■□□□□ 0.45
UPK1AO00322 CR392000.1-201ENST00000624770 1228 ntBASIC17.85■□□□□ 0.45
UPK1AO00322 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.85■□□□□ 0.45
UPK1AO00322 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms