Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 KRT8P9-201ENST00000558927 1449 ntBASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM9A6NGZ8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AC211429.1-201ENST00000415277 523 ntBASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 LIN28AP1-201ENST00000429574 405 ntBASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AC012306.2-201ENST00000609350 630 ntBASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AC005363.2-201ENST00000618631 242 ntBASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 AC116562.4-201ENST00000641316 2276 ntBASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM9A6NGZ8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM9A6NGZ8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM9A6NGZ8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms