Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.12■□□□□ 0.65
TBC1D3BA6NDS4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 AL109659.2-201ENST00000606809 1674 ntBASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 CLEC4GP1-201ENST00000596555 870 ntBASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TBC1D3BA6NDS4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 AC008556.1-201ENST00000610908 2040 ntBASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 ATP5G2P1-201ENST00000433580 426 ntBASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 DUSP5P1-201ENST00000441325 1139 ntBASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 AC011498.5-201ENST00000592027 486 ntBASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 AL157888.1-201ENST00000631930 593 ntBASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.1■□□□□ 0.65
TBC1D3BA6NDS4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 FEM1AP3-201ENST00000403722 1741 ntBASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.09■□□□□ 0.65
TBC1D3BA6NDS4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms