Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.9■□□□□ 0.46
LRIT2A6NDA9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRIT2A6NDA9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LRIT2A6NDA9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
LRIT2A6NDA9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.89■□□□□ 0.45
LRIT2A6NDA9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 AC007663.1-201ENST00000438948 1240 ntBASIC17.89■□□□□ 0.45
LRIT2A6NDA9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.89■□□□□ 0.45
LRIT2A6NDA9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 AP003041.3-201ENST00000527151 707 ntBASIC17.89■□□□□ 0.45
LRIT2A6NDA9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.89■□□□□ 0.45
LRIT2A6NDA9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LRIT2A6NDA9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRIT2A6NDA9 AC008556.1-201ENST00000610908 2040 ntBASIC17.88■□□□□ 0.45
LRIT2A6NDA9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 INGX-201ENST00000359239 846 ntBASIC17.87■□□□□ 0.45
LRIT2A6NDA9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 AC087499.1-201ENST00000418141 1075 ntBASIC17.87■□□□□ 0.45
LRIT2A6NDA9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 MCCD1P1-208ENST00000445732 328 ntBASIC17.87■□□□□ 0.45
LRIT2A6NDA9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 AC128688.1-201ENST00000487626 519 ntBASIC17.87■□□□□ 0.45
LRIT2A6NDA9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 MIR4674-201ENST00000582457 87 ntBASIC17.87■□□□□ 0.45
LRIT2A6NDA9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 AC010653.2-201ENST00000623505 997 ntBASIC17.87■□□□□ 0.45
LRIT2A6NDA9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRIT2A6NDA9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 AL357033.4-201ENST00000617703 1807 ntBASIC17.86■□□□□ 0.45
LRIT2A6NDA9 AL138781.2-201ENST00000617896 1843 ntBASIC17.86■□□□□ 0.45
LRIT2A6NDA9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.86■□□□□ 0.45
LRIT2A6NDA9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms