Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC090192.1-201ENST00000517740 490 ntBASIC20.35■□□□□ 0.85
CCDC66A2RUB6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 AC092118.2-201ENST00000613495 667 ntBASIC20.35■□□□□ 0.85
CCDC66A2RUB6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC66A2RUB6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 AL121832.2-201ENST00000610979 668 ntBASIC20.34■□□□□ 0.85
CCDC66A2RUB6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC66A2RUB6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 RPS2P52-201ENST00000469610 820 ntBASIC20.33■□□□□ 0.85
CCDC66A2RUB6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC66A2RUB6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC66A2RUB6 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.33■□□□□ 0.84
CCDC66A2RUB6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CCDC66A2RUB6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC66A2RUB6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC66A2RUB6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CCDC66A2RUB6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC66A2RUB6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 AC046158.3-201ENST00000624947 2558 ntBASIC20.32■□□□□ 0.84
CCDC66A2RUB6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 AC091874.3-201ENST00000512672 1195 ntBASIC20.32■□□□□ 0.84
CCDC66A2RUB6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 AC006557.6-201ENST00000623071 864 ntBASIC20.32■□□□□ 0.84
CCDC66A2RUB6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.32■□□□□ 0.84
CCDC66A2RUB6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 AC124283.5-201ENST00000624661 1809 ntBASIC20.32■□□□□ 0.84
CCDC66A2RUB6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC66A2RUB6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC66A2RUB6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms