Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RCN1P1-201ENST00000400413 996 ntBASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CRYGFP-201ENST00000418459 633 ntBASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TMPOP1-202ENST00000424642 1267 ntBASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC097488.1-201ENST00000507834 756 ntBASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 C2orf69P3-201ENST00000565542 1120 ntBASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 KRT8P8-201ENST00000434750 1448 ntBASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.14■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AC011506.1-201ENST00000474329 610 ntBASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SLC25A1P4-201ENST00000567977 778 ntBASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DGCR10-201ENST00000609839 495 ntBASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CYP2D8P-201ENST00000433633 1490 ntBASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.12■□□□□ 0.01
TCRBV4S1A1TA0A5B7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms