Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-4A0A0C4DH59 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-4A0A0C4DH59 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TRBV5-4A0A0C4DH59 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV5-4A0A0C4DH59 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-4A0A0C4DH59 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-4A0A0C4DH59 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-4A0A0C4DH59 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-4A0A0C4DH59 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-4A0A0C4DH59 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC034236.2-201ENST00000606662 1610 ntBASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 AL020996.1-203ENST00000536896 2307 ntBASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC112777.1-201ENST00000540175 1423 ntBASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 HOXB1-202ENST00000577092 1414 ntBASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV5-4A0A0C4DH59 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 AL499627.1-201ENST00000569373 2188 ntBASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.48■□□□□ 0.55
TRBV5-4A0A0C4DH59 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms