Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 AC091304.2-201ENST00000564639 760 ntBASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 RNF126P1-202ENST00000569893 925 ntBASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 AL109659.2-201ENST00000606809 1674 ntBASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 LINC01521-201ENST00000504184 1943 ntBASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC187A0A096LP49 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 TOB2P1-201ENST00000469761 992 ntBASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 AC010240.3-201ENST00000607688 395 ntBASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 AL732292.2-201ENST00000609649 430 ntBASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 HOXB1-202ENST00000577092 1414 ntBASIC17.81■□□□□ 0.44
CCDC187A0A096LP49 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 EMBP1-201ENST00000458200 901 ntBASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 AC104390.1-201ENST00000555663 520 ntBASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 RCC2P3-201ENST00000418112 1537 ntBASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC187A0A096LP49 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC187A0A096LP49 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms