Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 MIR7106-201ENST00000612419 65 ntBASIC0.79□□□□□ -2.28
KRTAP4-12Q9BQ66 MIR7151-201ENST00000617477 60 ntBASIC0.79□□□□□ -2.28
KRTAP4-12Q9BQ66 MIR7843-201ENST00000622274 79 ntBASIC0.79□□□□□ -2.28
KRTAP4-12Q9BQ66 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-12Q9BQ66 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-12Q9BQ66 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-12Q9BQ66 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 RNA5SP327-201ENST00000362494 101 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 RNU6-110P-201ENST00000384508 104 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 MIR887-201ENST00000401258 79 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 RNA5SP246-201ENST00000458909 119 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 RNU2-27P-201ENST00000516185 142 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 RNA5SP102-201ENST00000516865 106 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 AC006064.5-201ENST00000541782 248 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 MIR4524B-201ENST00000581569 115 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 AC091178.1-203ENST00000584586 279 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 MIR5684-201ENST00000585074 65 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 AL591424.2-201ENST00000617023 128 ntBASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-12Q9BQ66 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
KRTAP4-12Q9BQ66 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORA54-201ENST00000384281 123 ntBASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORD17-201ENST00000390930 237 ntBASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 RNU6-237P-201ENST00000515985 71 ntBASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 AL360157.1-201ENST00000565962 87 ntBASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 U7.8-201ENST00000619968 63 ntBASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC0.77□□□□□ -2.29
KRTAP4-12Q9BQ66 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 Y_RNA.137-201ENST00000363455 112 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP99-201ENST00000364020 114 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP306-201ENST00000411087 107 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP508-201ENST00000411327 119 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP446-201ENST00000515955 82 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP208-201ENST00000516156 78 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNU7-143P-201ENST00000516781 65 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 RNA5SP449-201ENST00000516871 130 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR548W-201ENST00000581970 74 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR4325-201ENST00000583049 90 ntBASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRTAP4-12Q9BQ66 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR422A-201ENST00000362286 90 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 Y_RNA.118-201ENST00000363300 101 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORA44-201ENST00000384584 132 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 Z95118.1-201ENST00000421372 247 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 CKS1BP6-201ENST00000424932 240 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 HMGN2P19-201ENST00000425149 265 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 AP000533.3-201ENST00000447704 118 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 UQCRHP3-201ENST00000451503 251 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR5680-201ENST00000577577 84 ntBASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
KRTAP4-12Q9BQ66 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORD114-30-201ENST00000364448 72 ntBASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR17-201ENST00000385012 84 ntBASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORD115-45-201ENST00000391078 81 ntBASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR5187-201ENST00000583479 76 ntBASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORA50A-202ENST00000629536 136 ntBASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
KRTAP4-12Q9BQ66 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 Y_RNA.449-201ENST00000384187 102 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 SNORD96B-201ENST00000386148 79 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 AC244250.2-201ENST00000418731 148 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR2682-201ENST00000580305 110 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 MIR4435-1-201ENST00000582552 80 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 AL353765.1-201ENST00000605514 183 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC0.73□□□□□ -2.29
KRTAP4-12Q9BQ66 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 317.7 ms