Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORA6-201ENST00000384033 151 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORA26.4-201ENST00000391188 123 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR1179-201ENST00000408703 91 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORA74C-2-201ENST00000411179 201 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 AL603825.1-201ENST00000438481 80 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 RNU7-55P-201ENST00000459426 62 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 RNA5SP341-201ENST00000516261 117 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 AC025627.2-201ENST00000576220 160 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR5680-201ENST00000577577 84 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR5004-201ENST00000579078 107 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 AC091178.1-203ENST00000584586 279 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR432-201ENST00000606207 94 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR8063-201ENST00000621930 81 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR6132-201ENST00000622083 109 ntBASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP4-11Q9BYQ6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
KRTAP4-11Q9BYQ6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.25
KRTAP4-11Q9BYQ6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RNU6-482P-201ENST00000391068 107 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 AC079140.2-201ENST00000506193 142 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RNU1-40P-201ENST00000516816 164 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RNU1-97P-201ENST00000516872 164 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR5704-201ENST00000584029 77 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR7851-201ENST00000610611 160 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 U7.6-201ENST00000610841 64 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR8068-201ENST00000618032 68 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 AC084368.1-201ENST00000620935 65 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR6733-201ENST00000635723 61 ntBASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRTAP4-11Q9BYQ6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR422A-201ENST00000362286 90 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 RNA5SP399-201ENST00000364003 117 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 SNORA44-201ENST00000384584 132 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR573-201ENST00000384964 99 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 SNORD105-201ENST00000386910 85 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 SNORD66.1-201ENST00000391230 76 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR1271-201ENST00000408537 86 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR1911-201ENST00000410783 80 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR4425-201ENST00000580572 84 ntBASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-11Q9BYQ6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 SNORD35B-201ENST00000363660 87 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR106A-201ENST00000384870 81 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 SNORD88.1-201ENST00000408684 91 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 HLA-N-201ENST00000437516 135 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 SNORD79.1-201ENST00000516069 84 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 AL512310.8-201ENST00000550183 120 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR4303-201ENST00000581299 66 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 MIR4677-201ENST00000584153 80 ntBASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-11Q9BYQ6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 481.8 ms