RNA–Protein interactions for RNA: ENST00000390490.1

TRAJ47-201, Transcript of T cell receptor alpha joining 47, humanhuman

APPRIS P1 BASIC

Gene TRAJ47, Length 57 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ47-201ENST00000390490 CHIC1Q5VXU3 224 aa4.94□□□□□ -1.62
TRAJ47-201ENST00000390490 AEBP2Q6ZN18 517 aaPredicted RBP4.86□□□□□ -1.63
TRAJ47-201ENST00000390490 PHF23Q9BUL5 403 aaPredicted RBP4.36□□□□□ -1.71
TRAJ47-201ENST00000390490 SENP3Q9H4L4 574 aaPredicted RBP4.11□□□□□ -1.75
TRAJ47-201ENST00000390490 PLPPR3Q6T4P5 718 aa4.1□□□□□ -1.75
TRAJ47-201ENST00000390490 ADRA2BP18089 450 aa3.82□□□□□ -1.8
TRAJ47-201ENST00000390490 PPP6R1Q9UPN7 881 aa3.79□□□□□ -1.8
TRAJ47-201ENST00000390490 FOXD1Q16676 465 aa3.78□□□□□ -1.8
TRAJ47-201ENST00000390490 KCNA4P22459 653 aa3.76□□□□□ -1.81
TRAJ47-201ENST00000390490 EHMT2Q96KQ7 1210 aa3.73□□□□□ -1.81
TRAJ47-201ENST00000390490 PPP4R3CPQ6ZMV5 832 aa3.63□□□□□ -1.83
TRAJ47-201ENST00000390490 PIAS4Q8N2W9 510 aaPredicted RBP3.62□□□□□ -1.83
TRAJ47-201ENST00000390490 SLC4A1APQ9BWU0 796 aaKnown RBP3.62□□□□□ -1.83
TRAJ47-201ENST00000390490 NCBP3Q53F19 620 aaKnown RBP3.61□□□□□ -1.83
TRAJ47-201ENST00000390490 CSRNP3Q8WYN3 585 aa3.59□□□□□ -1.83
TRAJ47-201ENST00000390490 NPM3O75607 178 aaKnown RBP3.54□□□□□ -1.84
TRAJ47-201ENST00000390490 CNKSR2Q8WXI2 1034 aa3.49□□□□□ -1.85
TRAJ47-201ENST00000390490 SCAF1Q9H7N4 1312 aaKnown RBP3.48□□□□□ -1.85
TRAJ47-201ENST00000390490 ZBTB22O15209 634 aa3.45□□□□□ -1.86
TRAJ47-201ENST00000390490 MSH5O43196 834 aa3.42□□□□□ -1.86
TRAJ47-201ENST00000390490 FOXD4L1Q9NU39 408 aa3.41□□□□□ -1.86
TRAJ47-201ENST00000390490 DNAJC5BQ9UF47 199 aa3.4□□□□□ -1.87
TRAJ47-201ENST00000390490 MAPK8IP2Q13387 824 aaPredicted RBP3.39□□□□□ -1.87
TRAJ47-201ENST00000390490 RNF216Q9NWF9 866 aaPredicted RBP3.37□□□□□ -1.87
TRAJ47-201ENST00000390490 HOXD11P31277 338 aaPredicted RBP3.31□□□□□ -1.88
TRAJ47-201ENST00000390490 DMRT2Q9Y5R5 561 aa3.31□□□□□ -1.88
TRAJ47-201ENST00000390490 SLC4A2P04920 1241 aa3.29□□□□□ -1.88
TRAJ47-201ENST00000390490 AMER1Q5JTC6 1135 aaPredicted RBP3.29□□□□□ -1.88
TRAJ47-201ENST00000390490 ATXN8OSP0DMR3 200 aa3.28□□□□□ -1.88
TRAJ47-201ENST00000390490 RTN4Q9NQC3 1192 aaKnown RBP3.28□□□□□ -1.88
TRAJ47-201ENST00000390490 SLC24A1O60721 1099 aa3.27□□□□□ -1.89
TRAJ47-201ENST00000390490 MYCNP04198 464 aaPredicted RBP3.27□□□□□ -1.89
TRAJ47-201ENST00000390490 FKBP8Q14318 412 aa3.25□□□□□ -1.89
TRAJ47-201ENST00000390490 DCAF8L1A6NGE4 600 aa3.17□□□□□ -1.9
TRAJ47-201ENST00000390490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.17□□□□□ -1.9
TRAJ47-201ENST00000390490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.16□□□□□ -1.9
TRAJ47-201ENST00000390490 HNRNPUL2Q1KMD3 747 aaKnown RBP3.16□□□□□ -1.9
TRAJ47-201ENST00000390490 ATF5Q9Y2D1 282 aaPredicted RBP3.16□□□□□ -1.9
TRAJ47-201ENST00000390490 SAMD1Q6SPF0 538 aaPredicted RBP3.15□□□□□ -1.91
TRAJ47-201ENST00000390490 U3KPZ7 1027 aaPredicted RBP3.12□□□□□ -1.91
TRAJ47-201ENST00000390490 ZNF219Q9P2Y4 722 aaPredicted RBP3.1□□□□□ -1.91
TRAJ47-201ENST00000390490 APLP2Q06481 763 aa3.09□□□□□ -1.91
TRAJ47-201ENST00000390490 FBXO3Q9UK99 471 aa3.09□□□□□ -1.91
TRAJ47-201ENST00000390490 SPDYE4A6NLX3 237 aa3.07□□□□□ -1.92
TRAJ47-201ENST00000390490 VASPP50552 380 aaPredicted RBP3.03□□□□□ -1.92
TRAJ47-201ENST00000390490 FBLN2P98095 1184 aa3.03□□□□□ -1.92
TRAJ47-201ENST00000390490 MKRN4PQ13434 485 aaPredicted RBP3.03□□□□□ -1.92
TRAJ47-201ENST00000390490 PROM2Q8N271 834 aa3.03□□□□□ -1.92
TRAJ47-201ENST00000390490 PLCB2Q00722 1185 aa3.02□□□□□ -1.93
TRAJ47-201ENST00000390490 DCAF8L2P0C7V8 631 aa3.01□□□□□ -1.93
TRAJ47-201ENST00000390490 TRHP20396 242 aaPredicted RBP3□□□□□ -1.93
TRAJ47-201ENST00000390490 POLA2Q14181 598 aa3□□□□□ -1.93
TRAJ47-201ENST00000390490 IFNLR1Q8IU57 520 aaPredicted RBP3□□□□□ -1.93
TRAJ47-201ENST00000390490 HAP1P54257 671 aaPredicted RBP2.99□□□□□ -1.93
TRAJ47-201ENST00000390490 SPINK5Q9NQ38 1064 aaPredicted RBP2.98□□□□□ -1.93
TRAJ47-201ENST00000390490 CAPN15O75808 1086 aa2.97□□□□□ -1.93
TRAJ47-201ENST00000390490 ZBTB12Q9Y330 459 aaPredicted RBP2.97□□□□□ -1.93
TRAJ47-201ENST00000390490 PKD2Q13563 968 aa2.96□□□□□ -1.94
TRAJ47-201ENST00000390490 VSIG10Q8N0Z9 540 aa2.95□□□□□ -1.94
TRAJ47-201ENST00000390490 KLHL34Q8N239 644 aa2.95□□□□□ -1.94
TRAJ47-201ENST00000390490 BCANQ96GW7 911 aa2.95□□□□□ -1.94
TRAJ47-201ENST00000390490 RNF39Q9H2S5 420 aa2.95□□□□□ -1.94
TRAJ47-201ENST00000390490 ECM2O94769 699 aaPredicted RBP2.94□□□□□ -1.94
TRAJ47-201ENST00000390490 SPOCK2Q92563 424 aa2.94□□□□□ -1.94
TRAJ47-201ENST00000390490 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.94□□□□□ -1.94
TRAJ47-201ENST00000390490 ABCB7O75027 752 aa2.93□□□□□ -1.94
TRAJ47-201ENST00000390490 C1QBPQ07021 282 aaKnown RBP2.93□□□□□ -1.94
TRAJ47-201ENST00000390490 BBXQ8WY36 941 aaPredicted RBP2.93□□□□□ -1.94
TRAJ47-201ENST00000390490 STAG3Q9UJ98 1225 aa2.93□□□□□ -1.94
TRAJ47-201ENST00000390490 ZNF692Q9BU19 519 aaPredicted RBP2.92□□□□□ -1.94
TRAJ47-201ENST00000390490 PAXIP1Q6ZW49 1069 aaPredicted RBP2.91□□□□□ -1.94
TRAJ47-201ENST00000390490 PLCD3Q8N3E9 789 aa2.91□□□□□ -1.94
TRAJ47-201ENST00000390490 TAOK2Q9UL54 1235 aa2.91□□□□□ -1.94
TRAJ47-201ENST00000390490 NPM1P06748 294 aaKnown RBP eCLIP2.9□□□□□ -1.95
TRAJ47-201ENST00000390490 PRKCSHP14314 528 aaPredicted RBP2.9□□□□□ -1.95
TRAJ47-201ENST00000390490 MIER1Q8N108 512 aa2.9□□□□□ -1.95
TRAJ47-201ENST00000390490 CFAP44Q96MT7 982 aa2.9□□□□□ -1.95
TRAJ47-201ENST00000390490 SPDYE2BA6NHP3 402 aa2.89□□□□□ -1.95
TRAJ47-201ENST00000390490 SPDYE6P0CI01 402 aa2.89□□□□□ -1.95
TRAJ47-201ENST00000390490 SPDYE2Q495Y8 402 aa2.89□□□□□ -1.95
TRAJ47-201ENST00000390490 PABPN1Q86U42 306 aaKnown RBP eCLIP2.89□□□□□ -1.95
TRAJ47-201ENST00000390490 KDM2AQ9Y2K7 1162 aa2.89□□□□□ -1.95
TRAJ47-201ENST00000390490 SSUH2Q9Y2M2 353 aa2.89□□□□□ -1.95
TRAJ47-201ENST00000390490 RGL2O15211 777 aa2.88□□□□□ -1.95
TRAJ47-201ENST00000390490 OSCARQ8IYS5 282 aa2.88□□□□□ -1.95
TRAJ47-201ENST00000390490 SPRYD3Q8NCJ5 442 aa2.88□□□□□ -1.95
TRAJ47-201ENST00000390490 PLEKHG5O94827 1062 aa2.87□□□□□ -1.95
TRAJ47-201ENST00000390490 DSG3P32926 999 aa2.87□□□□□ -1.95
TRAJ47-201ENST00000390490 CIZ1Q9ULV3 898 aaPredicted RBP2.87□□□□□ -1.95
TRAJ47-201ENST00000390490 CHGAP10645 457 aaKnown RBP2.86□□□□□ -1.95
TRAJ47-201ENST00000390490 TPRNQ4KMQ1 711 aa2.86□□□□□ -1.95
TRAJ47-201ENST00000390490 TSHZ2Q9NRE2 1034 aa2.86□□□□□ -1.95
TRAJ47-201ENST00000390490 ZBTB47Q9UFB7 747 aaPredicted RBP2.86□□□□□ -1.95
TRAJ47-201ENST00000390490 TRIM41Q8WV44 630 aa2.85□□□□□ -1.95
TRAJ47-201ENST00000390490 NBR1Q14596 966 aa2.82□□□□□ -1.96
TRAJ47-201ENST00000390490 GSE1Q14687 1217 aa2.82□□□□□ -1.96
TRAJ47-201ENST00000390490 HS6ST3Q8IZP7 471 aa2.82□□□□□ -1.96
TRAJ47-201ENST00000390490 DNAJC5Q9H3Z4 198 aa2.81□□□□□ -1.96
TRAJ47-201ENST00000390490 DCAF8Q5TAQ9 597 aa2.8□□□□□ -1.96
TRAJ47-201ENST00000390490 RIOK3O14730 519 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms