Protein–RNA interactions for Protein: Q9BQ66

KRTAP4-12, Keratin-associated protein 4-12, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-12Q9BQ66 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 AL031595.2-201ENST00000624215 19071 ntBASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
KRTAP4-12Q9BQ66 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 RNY4P19-201ENST00000362530 96 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 SNORA80A-201ENST00000363922 136 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 Y_RNA.349-201ENST00000365406 102 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 RNU6-455P-201ENST00000384681 107 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 SNORA77-201ENST00000408716 125 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 AC122688.1-201ENST00000541494 223 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 AC011195.1-201ENST00000578177 177 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 AC244107.2-201ENST00000611773 76 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 uc_338.32-201ENST00000615087 172 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 MIR8058-201ENST00000615737 89 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 TCL6_3.1-201ENST00000619064 137 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 U6.98-201ENST00000637157 84 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 MAPK10-286ENST00000641208 8747 ntBASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
KRTAP4-12Q9BQ66 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
KRTAP4-12Q9BQ66 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RNU1-15P-201ENST00000353977 144 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR383-201ENST00000362257 73 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 SNORA2.3-201ENST00000383920 135 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR128-1-201ENST00000384921 82 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RNU6ATAC-201ENST00000408749 126 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP492-201ENST00000411330 114 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP233-201ENST00000459153 113 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 SCARNA11.2-201ENST00000517183 154 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 RN7SL435P-201ENST00000584418 282 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR3653-201ENST00000625572 110 ntBASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC0.96□□□□□ -2.26
KRTAP4-12Q9BQ66 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP130-201ENST00000364431 114 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP513-201ENST00000364648 118 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP397-201ENST00000391323 118 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 HIST1H2APS3-201ENST00000403259 134 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 UBE2DNL-203ENST00000474922 222 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 SCARNA22-201ENST00000503991 125 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 RNU6-983P-201ENST00000516004 103 ntBASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 MVP-219ENST00000629059 120 ntTSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KRTAP4-12Q9BQ66 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP119-201ENST00000362715 117 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 Y_RNA.63-201ENST00000362841 102 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 SNORD56.5-201ENST00000364281 72 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP22-201ENST00000365393 109 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RNA5SP366-201ENST00000365454 123 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RNU1-89P-201ENST00000384592 164 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RNVU1-14-201ENST00000384770 164 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR449B-201ENST00000384995 97 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR589-201ENST00000385238 99 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR760-201ENST00000390220 80 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR548H1-201ENST00000408610 102 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR1179-201ENST00000408703 91 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 AC011998.1-201ENST00000433403 117 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MRPS21P3-201ENST00000436696 262 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RPS26P2-201ENST00000440331 348 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 AL691482.1-201ENST00000453255 87 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 AC108740.1-201ENST00000498629 225 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 RNU6-1049P-201ENST00000516414 107 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR5685-201ENST00000579080 79 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 SNORA25.18-201ENST00000607153 114 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 uc_338.1-201ENST00000612113 180 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 MIR6715A-201ENST00000615929 79 ntBASIC0.94□□□□□ -2.26
KRTAP4-12Q9BQ66 5S_rRNA.12-201ENST00000617631 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms