Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-11Q9BYQ6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-11Q9BYQ6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-11Q9BYQ6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-11Q9BYQ6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
KRTAP4-11Q9BYQ6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP4-11Q9BYQ6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 SNORA46-201ENST00000384762 135 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 SNORD67-201ENST00000390833 111 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR1251-201ENST00000408552 70 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU6-1133P-201ENST00000410963 100 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNA5SP247-201ENST00000411181 105 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 AC005326.1-201ENST00000429197 123 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 AC048334.1-201ENST00000477975 159 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNA5SP320-201ENST00000516263 124 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU4-54P-201ENST00000516428 129 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR4472-2-201ENST00000582069 67 ntBASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-11Q9BYQ6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 RNU6-563P-201ENST00000364872 108 ntBASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 RN7SL197P-201ENST00000466981 299 ntBASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR5706-201ENST00000579841 80 ntBASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR23C-201ENST00000579846 100 ntBASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 MIR6133-201ENST00000617057 108 ntBASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 uc_338.36-201ENST00000622331 158 ntBASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-11Q9BYQ6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-11Q9BYQ6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-11Q9BYQ6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-11Q9BYQ6 MAPK10-266ENST00000641066 6555 ntBASIC1.09□□□□□ -2.24
KRTAP4-11Q9BYQ6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-11Q9BYQ6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORA60-201ENST00000362396 134 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORA5B-201ENST00000363786 132 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 RNU1-63P-201ENST00000383902 164 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 RNU6-439P-201ENST00000384188 106 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORA48.8-201ENST00000391324 134 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 RNU6-513P-201ENST00000516104 104 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 SNORD59.2-201ENST00000516873 68 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 AL360157.1-201ENST00000565962 87 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR4752-201ENST00000579672 72 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR4524B-201ENST00000581569 115 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 AL137849.1-201ENST00000604767 169 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 MIR6868-201ENST00000611215 58 ntBASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-11Q9BYQ6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-11Q9BYQ6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
KRTAP4-11Q9BYQ6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms