Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 Y_RNA.119-201ENST00000363301 96 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 RNU1-112P-201ENST00000364401 164 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 Y_RNA.239-201ENST00000364444 113 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 MIR136-201ENST00000385207 82 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 RNU7-26P-201ENST00000458980 63 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 SNORD123-201ENST00000459473 70 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 AC107016.2-201ENST00000547968 190 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 AC108206.1-201ENST00000570186 4159 ntBASIC3.14□□□□□ -1.91
TRAF7Q6Q0C0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 MIR545-201ENST00000385085 106 ntBASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 RNA5SP137-201ENST00000516833 135 ntBASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 AC245166.1-201ENST00000521012 253 ntBASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 U6.109-201ENST00000636749 87 ntBASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRAF7Q6Q0C0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-949P-201ENST00000384040 107 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 SNORA75.1-201ENST00000391130 148 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 RNA5SP299-201ENST00000391203 116 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 RNU7-12P-201ENST00000516030 62 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 SNORA31.10-201ENST00000516482 106 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 AC022202.1-201ENST00000613515 211 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.12□□□□□ -1.91
TRAF7Q6Q0C0 SNORD60.1-201ENST00000362451 73 ntBASIC3.11□□□□□ -1.91
TRAF7Q6Q0C0 HMGN2P39-201ENST00000398005 273 ntBASIC3.11□□□□□ -1.91
TRAF7Q6Q0C0 RPS27P16-201ENST00000425758 201 ntBASIC3.11□□□□□ -1.91
TRAF7Q6Q0C0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAF7Q6Q0C0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TRAF7Q6Q0C0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRAF7Q6Q0C0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 RNU1-148P-201ENST00000384472 162 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 SNORA67.4-201ENST00000384688 142 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 MIR452-201ENST00000385020 85 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 RNA5SP465-201ENST00000391195 109 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 AL138827.1-201ENST00000402666 306 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-1052P-201ENST00000411398 104 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-719P-201ENST00000516671 104 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 AC121758.2-201ENST00000553271 193 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-92P-201ENST00000605893 104 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 AL662814.1-201ENST00000617364 121 ntBASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRAF7Q6Q0C0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-1250P-201ENST00000391218 107 ntBASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 RNA5SP237-201ENST00000410414 113 ntBASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 RNU6-752P-201ENST00000516376 102 ntBASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 SUB1P4-201ENST00000566062 339 ntBASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 MIR4696-201ENST00000581431 70 ntBASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 MIR4773-1-201ENST00000637203 78 ntBASIC3.09□□□□□ -1.91
TRAF7Q6Q0C0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRAF7Q6Q0C0 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 RNA5SP21-201ENST00000410917 96 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 AL606490.4-201ENST00000423117 127 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 AC244098.3-201ENST00000424803 96 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 HSPE1P9-201ENST00000440046 311 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 UBBP3-201ENST00000445497 241 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAF7Q6Q0C0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 RNU6-664P-201ENST00000362381 107 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 MIR520A-201ENST00000384862 85 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 MIR597-201ENST00000384968 97 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 AC019129.1-201ENST00000403786 261 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 RNU1-41P-201ENST00000516161 162 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 RNU6-1194P-201ENST00000516208 104 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 RNU1-48P-201ENST00000516400 162 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 CYP3A52P-201ENST00000563326 91 ntBASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRAF7Q6Q0C0 AP000648.3-201ENST00000623539 4507 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 RNU6-382P-201ENST00000365181 106 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 RNU1-109P-201ENST00000383960 147 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 SNORD63B-201ENST00000411005 70 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 RN7SL633P-201ENST00000488974 297 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 Y_RNA.697-201ENST00000516776 113 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 RNU11-2P-201ENST00000516898 142 ntBASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.06□□□□□ -1.92
TRAF7Q6Q0C0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRAF7Q6Q0C0 RNU6-859P-201ENST00000362728 107 ntBASIC3.05□□□□□ -1.92
TRAF7Q6Q0C0 RNU4-33P-201ENST00000364316 85 ntBASIC3.05□□□□□ -1.92
TRAF7Q6Q0C0 Y_RNA.258-201ENST00000364613 105 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms