Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 KRT125P-201ENST00000546827 989 ntBASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 KRT8P33-201ENST00000508125 1423 ntBASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAPPC1Q9Y5R8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 CICP6-201ENST00000457191 2729 ntBASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 ATP5G2P3-201ENST00000429083 425 ntBASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 AL162727.3-201ENST00000635661 2787 ntBASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAPPC1Q9Y5R8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms