Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA4Q9Y5G9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 AC010203.1-204ENST00000548782 407 ntBASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA4Q9Y5G9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA4Q9Y5G9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 LIN28AP1-201ENST00000429574 405 ntBASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 MTND4LP12-201ENST00000448237 295 ntBASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 HLA-A-209ENST00000638375 975 ntBASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGA4Q9Y5G9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 TNXA-203ENST00000507684 2038 ntBASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 WWOX-216ENST00000569818 525 ntBASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms