Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 AL031963.3-201ENST00000606441 850 ntBASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHTOPQ9Y3Y2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 AC012317.2-201ENST00000623305 2251 ntBASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CHTOPQ9Y3Y2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 KRT8P20-201ENST00000423953 1409 ntBASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 PTBP1P-201ENST00000554374 1601 ntBASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 PHGDH-210ENST00000641115 1638 ntBASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 AL671710.1-201ENST00000610245 2349 ntBASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CHTOPQ9Y3Y2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.51□□□□□ -0.25
CHTOPQ9Y3Y2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms