Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 PRSS44-201ENST00000515154 1146 ntBASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 AC026471.1-201ENST00000564629 3026 ntBASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 AC087289.5-201ENST00000586076 3175 ntBASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.28■□□□□ 0.36
RPH3AQ9Y2J0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3AQ9Y2J0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3AQ9Y2J0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3AQ9Y2J0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3AQ9Y2J0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.27■□□□□ 0.35
RPH3AQ9Y2J0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RPH3AQ9Y2J0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3AQ9Y2J0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 AC092865.7-201ENST00000641832 219 ntBASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3AQ9Y2J0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3AQ9Y2J0 AC020763.4-201ENST00000623414 4170 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms