Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHA4Q9UN74 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 AC008556.1-201ENST00000610908 2040 ntBASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 AC133561.5-201ENST00000635547 218 ntBASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 AL031598.1-201ENST00000561511 1773 ntBASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PCDHA4Q9UN74 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 AC097493.4-201ENST00000641197 219 ntBASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHA4Q9UN74 KRT18P22-201ENST00000402024 1347 ntBASIC21.52■■□□□ 1.03
PCDHA4Q9UN74 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHA4Q9UN74 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 AL357033.4-201ENST00000617703 1807 ntBASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHA4Q9UN74 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 Z98044.1-201ENST00000632503 1764 ntBASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 AC211429.1-201ENST00000415277 523 ntBASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHA4Q9UN74 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms