Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 RPS2P4-201ENST00000476944 856 ntBASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SALL4Q9UJQ4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 RCC2P6-201ENST00000526625 1557 ntBASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 AL359736.2-201ENST00000621992 437 ntBASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SALL4Q9UJQ4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
SALL4Q9UJQ4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 Z85996.1-201ENST00000494644 937 ntBASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SALL4Q9UJQ4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SALL4Q9UJQ4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL4Q9UJQ4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL4Q9UJQ4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SALL4Q9UJQ4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL4Q9UJQ4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SALL4Q9UJQ4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms