Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.99■□□□□ 0.79
CHD7Q9P2D1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.98■□□□□ 0.79
CHD7Q9P2D1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 PMS2P2-201ENST00000425039 1128 ntBASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 TERC-201ENST00000602385 541 ntBASIC19.98■□□□□ 0.79
CHD7Q9P2D1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 TREX1-205ENST00000625293 1783 ntBASIC19.98■□□□□ 0.79
CHD7Q9P2D1 MIR564-202ENST00000385049 94 ntBASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 AP001160.2-201ENST00000596071 487 ntBASIC19.98■□□□□ 0.79
CHD7Q9P2D1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.98■□□□□ 0.79
CHD7Q9P2D1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 LINC01711-201ENST00000598340 967 ntBASIC19.97■□□□□ 0.79
CHD7Q9P2D1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 AL162377.1-201ENST00000618844 1793 ntBASIC19.97■□□□□ 0.79
CHD7Q9P2D1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 AC073648.2-201ENST00000510116 352 ntBASIC19.97■□□□□ 0.79
CHD7Q9P2D1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD7Q9P2D1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 AC010240.3-201ENST00000607688 395 ntBASIC19.96■□□□□ 0.79
CHD7Q9P2D1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 HOXB1-202ENST00000577092 1414 ntBASIC19.96■□□□□ 0.79
CHD7Q9P2D1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.96■□□□□ 0.79
CHD7Q9P2D1 AC008556.1-201ENST00000610908 2040 ntBASIC19.95■□□□□ 0.78
CHD7Q9P2D1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 AC005332.3-201ENST00000589904 676 ntBASIC19.95■□□□□ 0.78
CHD7Q9P2D1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms