Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBP1Q9NZI7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 AL512353.2-201ENST00000448759 1962 ntBASIC19.2■□□□□ 0.66
UBP1Q9NZI7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBP1Q9NZI7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBP1Q9NZI7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.18■□□□□ 0.66
UBP1Q9NZI7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 AC097488.1-201ENST00000507834 756 ntBASIC19.18■□□□□ 0.66
UBP1Q9NZI7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBP1Q9NZI7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AC104581.1-202ENST00000635932 2618 ntBASIC19.17■□□□□ 0.66
UBP1Q9NZI7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 MFAP1P1-201ENST00000442257 1255 ntBASIC19.17■□□□□ 0.66
UBP1Q9NZI7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.17■□□□□ 0.66
UBP1Q9NZI7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms