Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RLIMQ9NVW2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RLIMQ9NVW2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.4
RLIMQ9NVW2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 POU5F1P3-201ENST00000428824 1078 ntBASIC17.57■□□□□ 0.4
RLIMQ9NVW2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 AC133681.1-201ENST00000465482 601 ntBASIC17.57■□□□□ 0.4
RLIMQ9NVW2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 AC110285.5-201ENST00000611501 352 ntBASIC17.57■□□□□ 0.4
RLIMQ9NVW2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 NOC2LP1-202ENST00000452600 2235 ntBASIC17.57■□□□□ 0.4
RLIMQ9NVW2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 KRT8P41-201ENST00000533985 1514 ntBASIC17.57■□□□□ 0.4
RLIMQ9NVW2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RLIMQ9NVW2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.56■□□□□ 0.4
RLIMQ9NVW2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 TSPY23P-201ENST00000440136 739 ntBASIC17.55■□□□□ 0.4
RLIMQ9NVW2 C1QBPP2-201ENST00000528754 825 ntBASIC17.55■□□□□ 0.4
RLIMQ9NVW2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RLIMQ9NVW2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms