Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 INGX-201ENST00000359239 846 ntBASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 AC010947.1-201ENST00000623454 693 ntBASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 WIZP1-201ENST00000531444 2299 ntBASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BLOC1S4Q9NUP1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 AC092338.2-201ENST00000568827 1415 ntBASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 AL499627.1-201ENST00000569373 2188 ntBASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 SLC25A1P2-201ENST00000430693 912 ntBASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 AL353719.1-201ENST00000566847 864 ntBASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BLOC1S4Q9NUP1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
BLOC1S4Q9NUP1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BLOC1S4Q9NUP1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 MMP23A-201ENST00000234610 1017 ntBASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 TSPY14P-201ENST00000303979 915 ntBASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 AP003041.3-201ENST00000527151 707 ntBASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
BLOC1S4Q9NUP1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 AC007663.1-201ENST00000438948 1240 ntBASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 BX088651.1-201ENST00000540551 451 ntBASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BLOC1S4Q9NUP1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms