Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KLHL1Q9NR64 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 FAM207BP-201ENST00000447172 505 ntBASIC17.74■□□□□ 0.43
KLHL1Q9NR64 ECEL1P2-202ENST00000465689 757 ntBASIC17.74■□□□□ 0.43
KLHL1Q9NR64 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 AL049597.2-201ENST00000565575 961 ntBASIC17.74■□□□□ 0.43
KLHL1Q9NR64 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHL1Q9NR64 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 TERF1P1-201ENST00000311003 1181 ntBASIC17.73■□□□□ 0.43
KLHL1Q9NR64 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 LIN28AP1-201ENST00000429574 405 ntBASIC17.73■□□□□ 0.43
KLHL1Q9NR64 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 AP000692.2-201ENST00000608391 879 ntBASIC17.73■□□□□ 0.43
KLHL1Q9NR64 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
KLHL1Q9NR64 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 MFAP1P1-201ENST00000442257 1255 ntBASIC17.72■□□□□ 0.43
KLHL1Q9NR64 ATP5G1P1-201ENST00000448724 379 ntBASIC17.72■□□□□ 0.43
KLHL1Q9NR64 AC091390.4-202ENST00000476426 537 ntBASIC17.72■□□□□ 0.43
KLHL1Q9NR64 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 AL445228.2-201ENST00000605589 952 ntBASIC17.72■□□□□ 0.43
KLHL1Q9NR64 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.72■□□□□ 0.43
KLHL1Q9NR64 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KLHL1Q9NR64 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms