Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 NOC2LP2-201ENST00000407594 1944 ntBASIC17.04■□□□□ 0.32
HINT3Q9NQE9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 AC069544.1-201ENST00000609399 999 ntBASIC17.04■□□□□ 0.32
HINT3Q9NQE9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.04■□□□□ 0.32
HINT3Q9NQE9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AC126763.1-201ENST00000552015 2118 ntBASIC17.03■□□□□ 0.32
HINT3Q9NQE9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 TSPY23P-201ENST00000440136 739 ntBASIC17.03■□□□□ 0.32
HINT3Q9NQE9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HINT3Q9NQE9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HINT3Q9NQE9 AC073592.3-201ENST00000625118 1834 ntBASIC17.02■□□□□ 0.31
HINT3Q9NQE9 PCDHB18P-201ENST00000524813 2368 ntBASIC17.02■□□□□ 0.31
HINT3Q9NQE9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.02■□□□□ 0.31
HINT3Q9NQE9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
HINT3Q9NQE9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HINT3Q9NQE9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HINT3Q9NQE9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.02■□□□□ 0.31
HINT3Q9NQE9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 AC068880.1-201ENST00000507289 2297 ntBASIC17.01■□□□□ 0.31
HINT3Q9NQE9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.01■□□□□ 0.31
HINT3Q9NQE9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HINT3Q9NQE9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms