Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 AC016769.1-201ENST00000409132 1010 ntBASIC17.13■□□□□ 0.33
HMG20AQ9NP66 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.13■□□□□ 0.33
HMG20AQ9NP66 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 AL162741.1-201ENST00000565563 1558 ntBASIC17.12■□□□□ 0.33
HMG20AQ9NP66 AC012317.2-201ENST00000623305 2251 ntBASIC17.12■□□□□ 0.33
HMG20AQ9NP66 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 MFSD11-216ENST00000590393 1141 ntBASIC17.12■□□□□ 0.33
HMG20AQ9NP66 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 AC087633.2-202ENST00000565166 1439 ntBASIC17.12■□□□□ 0.33
HMG20AQ9NP66 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMG20AQ9NP66 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMG20AQ9NP66 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms