Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 TSPY14P-201ENST00000303979 915 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 AC010203.1-204ENST00000548782 407 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 AC130371.2-201ENST00000619443 611 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 AL590326.2-201ENST00000625139 305 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 HLA-A-209ENST00000638375 975 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.78■□□□□ 0.76
CD248Q9HCU0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CD248Q9HCU0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CD248Q9HCU0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 AC008040.2-201ENST00000461049 708 ntBASIC19.77■□□□□ 0.76
CD248Q9HCU0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CD248Q9HCU0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CD248Q9HCU0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CD248Q9HCU0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 AL137013.1-201ENST00000432946 1228 ntBASIC19.76■□□□□ 0.75
CD248Q9HCU0 AC104076.2-201ENST00000448912 469 ntBASIC19.76■□□□□ 0.75
CD248Q9HCU0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.76■□□□□ 0.75
CD248Q9HCU0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CD248Q9HCU0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CD248Q9HCU0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CD248Q9HCU0 INGX-201ENST00000359239 846 ntBASIC19.75■□□□□ 0.75
CD248Q9HCU0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.75■□□□□ 0.75
CD248Q9HCU0 EGLN1P1-201ENST00000531623 762 ntBASIC19.75■□□□□ 0.75
CD248Q9HCU0 AC131212.4-201ENST00000623606 975 ntBASIC19.75■□□□□ 0.75
CD248Q9HCU0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms