Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 AK4P3-201ENST00000418260 669 ntBASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 CR769767.2-201ENST00000622735 460 ntBASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VAT1LQ9HCJ6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 AL512604.3-201ENST00000569583 964 ntBASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
VAT1LQ9HCJ6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 AL512353.2-201ENST00000448759 1962 ntBASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.83■■□□□ 1.08
VAT1LQ9HCJ6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AC009947.2-201ENST00000444014 672 ntBASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 COX11P1-201ENST00000489116 835 ntBASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AC140113.3-201ENST00000605663 199 ntBASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AC011558.1-201ENST00000623459 338 ntBASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 AL023973.1-201ENST00000624619 620 ntBASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VAT1LQ9HCJ6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 YBX1P2-201ENST00000489612 999 ntBASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VAT1LQ9HCJ6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
VAT1LQ9HCJ6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
VAT1LQ9HCJ6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VAT1LQ9HCJ6 RCC2P3-201ENST00000418112 1537 ntBASIC21.8■■□□□ 1.08
VAT1LQ9HCJ6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms