Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 AC012618.2-201ENST00000428058 849 ntBASIC18.04■□□□□ 0.48
BRF2Q9HAW0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 DGCR10-201ENST00000609839 495 ntBASIC18.04■□□□□ 0.48
BRF2Q9HAW0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 RPS2P55-201ENST00000397318 883 ntBASIC18.03■□□□□ 0.48
BRF2Q9HAW0 AC107956.1-201ENST00000494359 873 ntBASIC18.03■□□□□ 0.48
BRF2Q9HAW0 AC116562.2-201ENST00000507042 360 ntBASIC18.03■□□□□ 0.48
BRF2Q9HAW0 NUDT16P1-203ENST00000513809 620 ntBASIC18.03■□□□□ 0.48
BRF2Q9HAW0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 AC096733.2-201ENST00000609937 1394 ntBASIC18.03■□□□□ 0.48
BRF2Q9HAW0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRF2Q9HAW0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 AC005082.1-201ENST00000413042 2259 ntBASIC18.02■□□□□ 0.48
BRF2Q9HAW0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
BRF2Q9HAW0 AC009113.1-201ENST00000570267 2443 ntBASIC18.02■□□□□ 0.47
BRF2Q9HAW0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRF2Q9HAW0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 AC073592.3-201ENST00000625118 1834 ntBASIC18.01■□□□□ 0.47
BRF2Q9HAW0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.01■□□□□ 0.47
BRF2Q9HAW0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 AL158047.1-201ENST00000445918 881 ntBASIC18.01■□□□□ 0.47
BRF2Q9HAW0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.01■□□□□ 0.47
BRF2Q9HAW0 AC233702.5-201ENST00000584107 538 ntBASIC18.01■□□□□ 0.47
BRF2Q9HAW0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms