Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS33BQ9H267 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
VPS33BQ9H267 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
VPS33BQ9H267 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VPS33BQ9H267 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
VPS33BQ9H267 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.68■■□□□ 1.22
VPS33BQ9H267 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
VPS33BQ9H267 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.68■■□□□ 1.22
VPS33BQ9H267 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS33BQ9H267 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS33BQ9H267 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS33BQ9H267 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS33BQ9H267 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS33BQ9H267 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 RNA5SP419-201ENST00000515908 135 ntBASIC22.67■■□□□ 1.22
VPS33BQ9H267 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 AF238378.1-201ENST00000526806 358 ntBASIC22.67■■□□□ 1.22
VPS33BQ9H267 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.67■■□□□ 1.22
VPS33BQ9H267 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
VPS33BQ9H267 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS33BQ9H267 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 TSPY12P-201ENST00000421279 868 ntBASIC22.66■■□□□ 1.22
VPS33BQ9H267 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS33BQ9H267 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 AC009065.1-201ENST00000564055 1225 ntBASIC22.66■■□□□ 1.22
VPS33BQ9H267 AP001005.1-201ENST00000571755 1248 ntBASIC22.66■■□□□ 1.22
VPS33BQ9H267 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.66■■□□□ 1.22
VPS33BQ9H267 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.66■■□□□ 1.22
VPS33BQ9H267 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.66■■□□□ 1.22
VPS33BQ9H267 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VPS33BQ9H267 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
VPS33BQ9H267 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VPS33BQ9H267 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS33BQ9H267 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
VPS33BQ9H267 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS33BQ9H267 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 MIR574-201ENST00000385209 96 ntBASIC22.64■■□□□ 1.21
VPS33BQ9H267 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS33BQ9H267 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
VPS33BQ9H267 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS33BQ9H267 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
VPS33BQ9H267 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS33BQ9H267 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VPS33BQ9H267 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS33BQ9H267 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS33BQ9H267 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS33BQ9H267 AC006333.2-201ENST00000607957 2099 ntBASIC22.63■■□□□ 1.21
VPS33BQ9H267 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS33BQ9H267 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 AL773604.1-201ENST00000617417 272 ntBASIC22.63■■□□□ 1.21
VPS33BQ9H267 AC139530.3-201ENST00000620344 690 ntBASIC22.63■■□□□ 1.21
VPS33BQ9H267 AF228730.7-201ENST00000641842 219 ntBASIC22.63■■□□□ 1.21
VPS33BQ9H267 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VPS33BQ9H267 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VPS33BQ9H267 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
VPS33BQ9H267 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms