Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC113Q9H0I3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 AP003041.3-201ENST00000527151 707 ntBASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 RN7SL850P-201ENST00000579959 291 ntBASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC113Q9H0I3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 AC141586.3-201ENST00000562166 1838 ntBASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 HMGA1P5-201ENST00000412453 271 ntBASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 AC092865.7-201ENST00000641832 219 ntBASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 AL032819.2-201ENST00000624543 2162 ntBASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC113Q9H0I3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC113Q9H0I3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms