Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC46A2Q9BY10 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 AL391807.1-203ENST00000604392 2365 ntBASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 AC141586.3-201ENST00000562166 1838 ntBASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 MIR564-202ENST00000385049 94 ntBASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 AC092119.3-201ENST00000612618 583 ntBASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 AL162741.1-201ENST00000565563 1558 ntBASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 AC016734.2-201ENST00000624325 1377 ntBASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC46A2Q9BY10 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 AL450487.1-201ENST00000426799 995 ntBASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 AC104390.1-201ENST00000555663 520 ntBASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 AL136038.4-201ENST00000603606 1261 ntBASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 AC012313.10-201ENST00000623509 926 ntBASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC46A2Q9BY10 KRT8P7-201ENST00000533003 1432 ntBASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 HOXB1-202ENST00000577092 1414 ntBASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC46A2Q9BY10 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 AFG3L1P-217ENST00000557444 2447 ntBASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 MIR662-201ENST00000384847 95 ntBASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 TSSC2-201ENST00000450217 709 ntBASIC19.41■□□□□ 0.7
SLC46A2Q9BY10 BX276092.5-203ENST00000456199 560 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms