Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO3Q9BXY4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 AL359736.2-201ENST00000621992 437 ntBASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 CR392000.1-201ENST00000624770 1228 ntBASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO3Q9BXY4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.33■□□□□ 0.37
RSPO3Q9BXY4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 AC004951.3-201ENST00000418645 1148 ntBASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 AP002982.1-201ENST00000492365 877 ntBASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 PRSS44-201ENST00000515154 1146 ntBASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 AC008622.2-201ENST00000617006 1229 ntBASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 NOC2LP2-201ENST00000407594 1944 ntBASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO3Q9BXY4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 AC067852.2-201ENST00000590513 2313 ntBASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 CKBP1-201ENST00000565489 1086 ntBASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.32■□□□□ 0.36
RSPO3Q9BXY4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 KRT16P1-201ENST00000399124 1418 ntBASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 B3GAT3P1-201ENST00000471720 806 ntBASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.31■□□□□ 0.36
RSPO3Q9BXY4 AC011298.2-201ENST00000617989 482 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms