Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFAF3Q9BU61 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFAF3Q9BU61 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFAF3Q9BU61 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFAF3Q9BU61 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFAF3Q9BU61 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 RNA5SP413-201ENST00000516373 109 ntBASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 AC010980.2-201ENST00000587099 1412 ntBASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NDUFAF3Q9BU61 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 LSM12P1-201ENST00000411836 588 ntBASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 AC098934.4-201ENST00000564127 592 ntBASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 AC100791.3-201ENST00000617619 330 ntBASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NDUFAF3Q9BU61 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 AC135776.1-201ENST00000319817 2481 ntBASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.52□□□□□ -0.08
NDUFAF3Q9BU61 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NDUFAF3Q9BU61 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms