Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
VGLL1Q99990 BICD1-207ENST00000551848 1962 ntBASIC14.31□□□□□ -0.12
VGLL1Q99990 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.31□□□□□ -0.12
VGLL1Q99990 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VGLL1Q99990 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VGLL1Q99990 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.3□□□□□ -0.12
VGLL1Q99990 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.3□□□□□ -0.12
VGLL1Q99990 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.3□□□□□ -0.12
VGLL1Q99990 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VGLL1Q99990 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.3□□□□□ -0.12
VGLL1Q99990 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.3□□□□□ -0.12
VGLL1Q99990 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.3□□□□□ -0.12
VGLL1Q99990 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.3□□□□□ -0.12
VGLL1Q99990 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.3□□□□□ -0.12
VGLL1Q99990 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.3□□□□□ -0.12
VGLL1Q99990 AC083906.6-201ENST00000641366 219 ntBASIC14.3□□□□□ -0.12
VGLL1Q99990 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
VGLL1Q99990 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.3□□□□□ -0.12
VGLL1Q99990 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.3□□□□□ -0.12
VGLL1Q99990 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
VGLL1Q99990 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.3□□□□□ -0.12
VGLL1Q99990 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
VGLL1Q99990 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 AL133373.2-201ENST00000623187 2828 ntBASIC14.29□□□□□ -0.12
VGLL1Q99990 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.29□□□□□ -0.12
VGLL1Q99990 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VGLL1Q99990 SOX15-203ENST00000570788 1093 ntBASIC14.29□□□□□ -0.12
VGLL1Q99990 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
VGLL1Q99990 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.29□□□□□ -0.12
VGLL1Q99990 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.29□□□□□ -0.12
VGLL1Q99990 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.29□□□□□ -0.12
VGLL1Q99990 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.29□□□□□ -0.12
VGLL1Q99990 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
VGLL1Q99990 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
VGLL1Q99990 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VGLL1Q99990 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.29□□□□□ -0.12
VGLL1Q99990 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
VGLL1Q99990 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.29□□□□□ -0.12
VGLL1Q99990 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VGLL1Q99990 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VGLL1Q99990 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VGLL1Q99990 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VGLL1Q99990 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VGLL1Q99990 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VGLL1Q99990 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 AL354751.1-201ENST00000412768 1863 ntBASIC14.28□□□□□ -0.12
VGLL1Q99990 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 NCF1B-203ENST00000435988 1254 ntBASIC14.28□□□□□ -0.12
VGLL1Q99990 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms